SnpEff
Supported Tool
SnpEff is a genetic variant annotation and effect prediction toolbox. It annotates and predicts the effects of variants on genes (such as amino acid changes).
Description
The SnpEff module parses results generated by SnpEff, a genetic variant annotation and effect prediction toolbox. It annotates and predicts the effects of variants on genes (such as amino acid changes).
MultiQC parses the summary .csv file that is generated by SnpEff. Note that
you must run SnpEff with -csvStats <filename> for this to be generated.
See the SnpEff
documentation for more information.
File search patterns
snpeff:
contents: SnpEff_version
max_filesize: 5000000