Bowtie 1
Supported Tool
Bowtie 1 is an ultrafast, memory-efficient short read aligner.
Description
The Bowtie 1 module parses results generated by Bowtie, an ultrafast, memory-efficient short read aligner.
File search patterns
bowtie1:
contents: "# reads processed:"
exclude_fn:
- bowtie.left_kept_reads.log
- bowtie.left_kept_reads.m2g_um.log
- bowtie.left_kept_reads.m2g_um_seg1.log
- bowtie.left_kept_reads.m2g_um_seg2.log
- bowtie.right_kept_reads.log
- bowtie.right_kept_reads.m2g_um.log
- bowtie.right_kept_reads.m2g_um_seg1.log
- bowtie.right_kept_reads.m2g_um_seg2.log
shared: true